STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103457762DDE_Tnp_1_7 domain-containing protein. (570 aa)    
Predicted Functional Partners:
LOC103457799
Uncharacterized protein.
   
 0.815
LOC103475178
Ig_4 domain-containing protein.
   
 0.796
cd3e
Ig_4 domain-containing protein.
   
 0.796
LOC103465012
Ig-like domain-containing protein.
   
 0.656
syk
Tyrosine-protein kinase.
   
 0.515
LOC103468233
Tyrosine-protein kinase.
   
 0.515
oxsm
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.497
fdx1
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.476
fdx2
Ferredoxin 2.
   
 0.476
LOC103470832
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.476
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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