STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103457816Uncharacterized protein. (606 aa)    
Predicted Functional Partners:
atf7ip
Activating transcription factor 7 interacting protein.
   
 0.897
atf7ip2
Fibronectin type-III domain-containing protein.
   
 0.897
arl14ep
ADP-ribosylation factor-like 14 effector protein.
    
 
 0.865
ENSPREP00000020019
THAP-type domain-containing protein.
    
 
 0.711
plod1
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a.
    
  0.662
plod2
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2.
    
  0.662
YTHDC2
YTH domain containing 2.
   
 
 0.577
eed
Embryonic ectoderm development.
   
 0.572
rbbp5
Retinoblastoma binding protein 5.
   
 0.559
ENSPREP00000001668
ANK_REP_REGION domain-containing protein.
   
 0.558
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.