STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103459137PPFIA binding protein 1a. (879 aa)    
Predicted Functional Partners:
LOC103466812
Cyclin D2, a; Belongs to the cyclin family.
      
 0.681
cttnbp2nl
CTTNBP2 N-terminal like a.
      
 0.681
capza1
F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
      
 0.681
ppfia4
PTPRF interacting protein alpha 4.
   
0.621
LOC103468986
PTPRF interacting protein alpha 3.
   
0.621
LOC103463013
PTPRF interacting protein alpha 1.
   
0.621
PPFIA3
PTPRF interacting protein alpha 3.
   
0.621
ppfia2
PTPRF interacting protein alpha 2.
   
0.621
ENSPREP00000007561
Kazrin, periplakin interacting protein b.
   
0.526
KAZN
Kazrin, periplakin interacting protein a.
   
0.526
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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