STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
henmt1HEN methyltransferase 1. (360 aa)    
Predicted Functional Partners:
dicer1
Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily.
   
 
 0.638
pld6
Phospholipase D family, member 6.
      
 0.625
parn
Poly(A)-specific ribonuclease (deadenylation nuclease).
      
 0.619
asz1
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
     
 0.593
tdrkh
Tudor and KH domain containing.
     
 0.593
ENSPREP00000022562
Tudor domain containing 9.
     
 0.593
helz2
C3H1-type domain-containing protein.
     
 0.553
LOC103467777
Zgc:56699.
      
 0.550
fkbp6
Peptidylprolyl isomerase.
      
 0.549
tdrd1
Tudor domain containing 1.
    
 0.522
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.