STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DYNLT3Dynein, light chain, Tctex-type 3. (120 aa)    
Predicted Functional Partners:
ENSPREP00000014094
NDK domain-containing protein.
    
 0.756
bub3
BUB3 mitotic checkpoint protein.
   
 
 0.735
tctex1d2
Tctex1 domain containing 2.
    
 
 0.690
dnal4
Dynein light chain.
   
 
 0.679
DYNLRB2
Dynein light chain roadblock.
   
 
 0.675
DYNLRB1
Dynein light chain roadblock-type 1.
   
 
 0.675
ENSPREP00000032211
Robl_LC7 domain-containing protein.
   
 
 0.675
TCTEX1D1
Tctex1 domain containing 1.
    
 
 0.650
DYNC1I1
Dynein cytoplasmic 1 intermediate chain 1.
   
 
 0.627
LOC103458526
Dynein, cytoplasmic 1, intermediate chain 2a.
   
 
 0.627
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.