STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103481302FRA10A associated CGG repeat 1. (332 aa)    
Predicted Functional Partners:
cwc27
CWC27 spliceosome associated cyclophilin.
   
   0.621
ess2
Ess-2 splicing factor homolog.
    
 
 0.567
engase
Endo-beta-N-acetylglucosaminidase.
      
 0.549
cherp
Calcium homeostasis endoplasmic reticulum protein.
    
 
 0.457
zrsr2
Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2.
   
 
 0.449
ik
IK cytokine.
   
   0.448
sf3b2
Splicing factor 3b, subunit 2.
    
   0.433
LOC103465114
WNK lysine deficient protein kinase 2.
    
  0.415
ENSPREP00000014417
WNK lysine deficient protein kinase 2.
    
  0.415
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.