STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgap35Uncharacterized protein. (1553 aa)    
Predicted Functional Partners:
LOC103465141
Uncharacterized protein.
    
 0.959
LOC103466989
Uncharacterized protein.
    
 0.959
LOC103467136
Uncharacterized protein.
    
 0.959
LOC103467436
Uncharacterized protein.
    
 0.959
LOC103467398
Uncharacterized protein.
    
 0.959
SRC
Tyrosine-protein kinase.
    
 0.930
LOC103467856
Tyrosine-protein kinase.
    
 0.930
arhgap5
Rho GTPase activating protein 5.
  
  
 
0.901
LOC103475743
Rho GTPase activating protein 35b.
  
  
 
0.901
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
    
 0.890
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.