STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAZNKazrin, periplakin interacting protein a. (896 aa)    
Predicted Functional Partners:
LOC103472577
Uncharacterized protein.
   
 0.969
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 0.969
LOC103475843
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.809
cask
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.809
ppl
Periplakin.
    
 0.580
LOC103468402
Envoplakin b.
    
 0.537
evpl
Envoplakin a.
    
 0.537
LOC103469736
Envoplakin a.
    
 0.537
PPFIBP2
Uncharacterized protein.
   
0.526
LOC103462868
PPFIA binding protein 2a.
   
0.526
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.