STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103467990Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (266 aa)    
Predicted Functional Partners:
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.565
LOC103464537
Macrophage stimulating 1 receptor a.
    
  0.565
mst1r
Macrophage stimulating 1 receptor b.
    
  0.565
neu1
Neuraminidase 1.
     
 0.475
LOC103465673
Carboxypeptidase A1.
   
 
 0.472
CPA1
Carboxypeptidase A1.
   
 
 0.472
LOC103465733
Carboxypeptidase A4.
   
 
 0.472
f13a1
TGc domain-containing protein.
     
 0.468
LOC103464362
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
     0.466
LOC103473964
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
   
 0.432
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.