STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000033817Uncharacterized protein. (449 aa)    
Predicted Functional Partners:
ENSPREP00000033823
Uncharacterized protein.
 
     0.929
ENSPREP00000030560
Uncharacterized protein.
 
   
  0.901
ENSPREP00000033800
Uncharacterized protein.
 
      0.900
ENSPREP00000030577
Uncharacterized protein.
 
   
 
0.838
agrn
Agrin.
    
 0.719
ldlrap1
Low density lipoprotein receptor adaptor protein 1b.
    
 0.628
ENSPREP00000030224
PID domain-containing protein.
    
 0.607
pcsk9
Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family.
    
 0.605
RELN
Reelin.
    
 0.588
LOC103476799
Dickkopf WNT signaling pathway inhibitor 1a.
    
 0.583
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.