STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000033933VWFD domain-containing protein. (154 aa)    
Predicted Functional Partners:
ENSPREP00000033976
Uncharacterized protein.
 
   
0.794
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.790
ENSPREP00000033965
Uncharacterized protein.
 
  
 0.772
ENSPREP00000033952
Uncharacterized protein.
 
      0.724
LOC103461597
NIDO domain-containing protein.
 
    
 0.667
LOC103481796
NIDO domain-containing protein.
 
  
 0.602
ENSPREP00000033955
Uncharacterized protein.
 
     
0.596
LOC103461037
RAN binding protein 2.
   
 
  0.577
ENSPREP00000033970
VWFD domain-containing protein.
 
    
0.537
ENSPREP00000033935
Uncharacterized protein.
 
  
 0.477
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.