STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103462436Pleckstrin homology domain containing, family A member 7b. (1081 aa)    
Predicted Functional Partners:
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.632
rps27a
Ribosomal protein S27a.
    
 0.611
lats2
Large tumor suppressor kinase 2.
    
 0.577
lats1
Large tumor suppressor kinase 1.
    
 0.577
LOC103462420
Tight junction protein 1a; Belongs to the MAGUK family.
  
 0.573
LOC103456598
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.502
Birc6
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.501
sav1
Salvador family WW domain containing protein 1.
    
 0.498
ENSPREP00000015831
Uncharacterized protein.
   
  0.496
ENSPREP00000015870
Uncharacterized protein.
   
  0.496
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.