STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103467976G_PROTEIN_RECEP_F3_4 domain-containing protein. (818 aa)    
Predicted Functional Partners:
tas1r3
Taste receptor, type 1, member 3.
  
0.991
LOC103467726
RAD21 cohesin complex component like 1.
    
 
 0.566
espn
Espin.
    
 
 0.559
LOC103467277
G protein-coupled receptor 153.
   
  
 0.529
acot7
Acyl-CoA thioesterase 7.
      
 0.525
arhgef16
Rho guanine nucleotide exchange factor (GEF) 16.
      
 0.525
ppih
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
      
 0.525
tprg1l
Tumor protein p63 regulated 1-like.
   
  
 0.525
wrap73
WD repeat containing, antisense to TP73.
      
 0.525
rer1
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.
 
    
 0.525
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.