STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stk33Serine/threonine kinase 33. (345 aa)    
Predicted Functional Partners:
LOC103462447
RIC3 acetylcholine receptor chaperone.
    
 0.663
copb1
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 
 0.636
calm2
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 0.601
calm1
Calmodulin 3a (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 0.601
calm3
Calmodulin 3.
   
 0.601
rras2
RAS related 2.
   
 0.598
psma1
Proteasome endopeptidase complex.
   
  
 0.580
dcx
Uncharacterized protein.
 
  
 
 0.564
LOC103480422
Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.
  
 0.557
LOC103462448
LIM domain only 1.
   
  
 0.549
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.