STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103477053Uncharacterized protein. (1336 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.850
LOC103465321
Junction plakoglobin a.
   
 0.795
LOC103472282
Uncharacterized protein.
   
 0.793
LOC103476642
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.696
LOC103463938
Catenin (cadherin-associated protein), delta 1.
   
 0.695
CTNND1
Catenin delta 1.
   
 0.695
ARVCF
ARVCF delta catenin family member b.
   
 0.695
LOC103462596
Talin 2a.
   
 0.690
tln2
Talin 2b.
   
 0.690
LOC103473492
Talin 1.
   
 0.690
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.