STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oit3Oncoprotein induced transcript 3. (576 aa)    
Predicted Functional Partners:
Map6d1
MAP6 domain containing 1.
    
 0.587
mcu
Mitochondrial calcium uniporter.
 
    
 0.495
med24
Mediator complex subunit 24.
    
 0.447
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.442
plpp3
Phospholipid phosphatase 3.
    
 
 0.442
MCUB
Mitochondrial calcium uniporter dominant negative beta subunit.
 
    
 0.418
vwa1
Uncharacterized protein.
    
 0.406
LOC103467107
Von Willebrand factor A domain containing 1.
    
 0.406
mrpl48
Mitochondrial ribosomal protein L48.
      
 0.402
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.