STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFX7Regulatory factor X7. (1325 aa)    
Predicted Functional Partners:
rfxank
Regulatory factor X-associated ankyrin-containing protein.
    
 
 0.919
ankra2
Ankyrin repeat, family A (RFXANK-like), 2.
    
 
 0.903
atr
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.609
rfx4
Regulatory factor X, 4.
    
 
0.601
rfx5
Regulatory factor X, 5.
    
 
0.587
hoxb2
Homeobox B2a.
      
 0.560
chek2
Checkpoint kinase 2.
   
 
 0.547
rfxap
Regulatory factor X-associated protein.
    
 
 0.497
ttc25
Tetratricopeptide repeat domain 25.
    
 
 0.492
LOC103467419
TEA domain transcription factor 3.
      
 0.476
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.