STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cc2d1bCoiled-coil and C2 domain containing 1B. (870 aa)    
Predicted Functional Partners:
LOC102231495
Charged multivesicular body protein 4C.
    
 0.771
LOC102220940
Charged multivesicular body protein 4Bb.
    
 0.771
LOC102220112
Uncharacterized protein.
    
 0.771
tm9sf1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
    
 0.737
chmp3
Charged multivesicular body protein 3.
     
 0.737
chmp2a
Charged multivesicular body protein 2A.
     
 0.734
ist1
IST1 factor associated with ESCRT-III.
     
 0.731
LOC102226311
Charged multivesicular body protein 6a.
     
 0.625
chmp6
Charged multivesicular body protein 6.
     
 0.625
chmp2b
Charged multivesicular body protein 2Bb.
     
 0.590
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.