STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
olig2Oligodendrocyte lineage transcription factor 2. (273 aa)    
Predicted Functional Partners:
LOC102227328
NK2 homeobox 2a.
   
 0.689
sox10
SRY-box transcription factor 10.
   
 0.658
LOC102223904
Inhibitor of DNA binding 4.
    
 
 0.591
LOC102235379
Glial fibrillary acidic protein; Belongs to the intermediate filament family.
   
  
 0.587
nkx6-1
NK6 homeobox 1.
   
  
 0.565
irx3
Iroquois homeobox 3a.
      
 0.560
ets1
V-ets avian erythroblastosis virus E26 oncogene homolog 1.
   
  
 0.517
shh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
      
 0.506
LOC102224129
Solute carrier family 25 member 18; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.500
LOC102222706
Glycerophosphodiester phosphodiesterase domain containing 5a.
      
 0.493
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.