STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102233152Fam20C domain-containing protein. (578 aa)    
Predicted Functional Partners:
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
  
 
0.888
fam20b
FAM20B glycosaminoglycan xylosylkinase.
  
 
0.767
LOC102231344
Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.
     
 0.542
pcsk9
Proprotein convertase subtilisin/kexin type 9.
    
 0.524
penk
Uncharacterized protein.
    
 0.514
bmp15
Bone morphogenetic protein 15.
    
 0.497
pdia6
Protein disulfide isomerase family A, member 6; Belongs to the protein disulfide isomerase family.
    
 0.493
scg3
Secretogranin III.
    
  0.492
LOC102226913
Alpha-2-HS-glycoprotein 2.
    
  0.492
Fga
Fibrinogen alpha chain.
    
  0.486
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.