STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
myo15aMyosin XVAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (3070 aa)    
Predicted Functional Partners:
ush1c
Usher syndrome 1C.
   
 0.624
anks4b
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.554
LOC102224739
Usher syndrome 1Ga (autosomal recessive).
   
 0.554
LOC102233199
Usher syndrome 1Gb (autosomal recessive).
   
 0.554
whrn
Whirlin a.
    
 0.529
ENSXMAP00000032037
PDZ domain-containing protein.
    
 0.529
LOC102233680
Whirlin b.
    
 0.529
neo1
Neogenin 1b.
    
  0.463
dcc
DCC netrin 1 receptor.
    
  0.463
calm3
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.414
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.