STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102235077Si:dkey-224e22.2; Belongs to the glycosyl hydrolase 35 family. (582 aa)    
Predicted Functional Partners:
neu1
Neuraminidase 1.
  
 0.659
LOC102229123
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.558
ctsa
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.558
gla
Alpha-galactosidase.
  
 
 0.527
naga
Alpha-galactosidase.
  
 
 0.510
cpvl
Carboxypeptidase vitellogenic like; Belongs to the peptidase S10 family.
   
 0.488
fuca1
Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.
 
 
 0.475
LOC102220201
Sialidase 4.
   
 
 0.473
fuca2
Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.
 
 
 0.469
ENSXMAP00000038367
Uncharacterized protein.
   
 0.451
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.