STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF26Rho guanine nucleotide exchange factor 26. (962 aa)    
Predicted Functional Partners:
LOC102223754
Ras homolog family member Gb.
    
 0.954
M4A4T1_XIPMA
Uncharacterized protein.
    
 0.954
M4A4T4_XIPMA
Ras homolog gene family, member Gd.
    
 0.954
CDC42
Cell division cycle 42.
    
 0.547
LOC102226130
Cell division cycle 42.
    
 0.547
rhobtb3
Si:dkey-6b12.5.
    
 0.520
ddx51
DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family.
      
 0.465
rasl10a
RAS-like, family 10, member A.
    
 0.431
LOC102232343
Epithelial mitogen homolog (mouse).
      
 0.408
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.