STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbrg1Transforming growth factor beta regulator 1. (546 aa)    
Predicted Functional Partners:
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.762
rbbp5
Retinoblastoma binding protein 5.
    
 0.756
ARHGEF17
Rho guanine nucleotide exchange factor (GEF) 17.
   
  
 0.677
tsku
Tsukushi small leucine rich proteoglycan homolog (Xenopus laevis).
      
 0.670
cops2
COP9 signalosome subunit 2.
   
  
 0.663
hspa13
Heat shock protein 70 family, member 13.
    
 
 0.660
cenpn
Centromere protein N.
   
 0.633
P2RY6
Pyrimidinergic receptor P2Y6; Belongs to the G-protein coupled receptor 1 family.
      
 0.628
kntc1
Kinetochore associated 1.
      
 0.618
fbxo3
F-box protein 3.
      
 0.604
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.