STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102235607WH1 domain-containing protein. (376 aa)    
Predicted Functional Partners:
nf1
Neurofibromin 1b.
    
 0.658
nek2
NIMA-related kinase 2.
    
 0.658
zyx
Zyxin.
   
 0.645
tes
Testis derived transcript (3 LIM domains).
   
 0.635
LOC102231870
Filamin binding LIM protein 1.
    
 0.628
trip6
Uncharacterized protein.
    
 0.585
LOC102221655
LIM domain containing preferred translocation partner in lipoma.
    
 0.585
LOC102232684
Profilin; Belongs to the profilin family.
   
 0.524
LOC102228356
Profilin; Belongs to the profilin family.
   
 0.524
LOC102226806
Profilin; Belongs to the profilin family.
   
 0.524
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.