STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcdh9Protocadherin 9. (1194 aa)    
Predicted Functional Partners:
CTNND1
Catenin delta 1.
   
 0.623
LOC102237360
Catenin (cadherin-associated protein), delta 1.
   
 0.623
ctnnal1
Catenin (cadherin-associated protein), alpha-like 1.
    
 0.618
TNS3
Tensin 3.
   
  
 0.515
TNS3-2
Tensin 3.
   
  
 0.515
ctnna2
Catenin (cadherin-associated protein), alpha 2.
    
 0.500
LOC102237146
Ig-like domain-containing protein.
    
 0.494
M4A052_XIPMA
Tensin 1.
   
  
 0.401
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.