STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdh11Cadherin 11, type 2, OB-cadherin (osteoblast); Cadherins are calcium-dependent cell adhesion proteins. (819 aa)    
Predicted Functional Partners:
CTNND1
Catenin delta 1.
   
 0.742
LOC102237360
Catenin (cadherin-associated protein), delta 1.
   
 0.742
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.693
LOC102226016
Junction plakoglobin a.
    
 0.666
ctnna2
Catenin (cadherin-associated protein), alpha 2.
    
 0.621
ctnnal1
Catenin (cadherin-associated protein), alpha-like 1.
    
 0.596
ARVCF
ARVCF delta catenin family member b.
   
 0.561
LOC102234936
Uncharacterized protein.
    
 0.559
LOC102219293
Protein tyrosine phosphatase receptor type Sa.
   
 0.553
LOC102237776
Protein tyrosine phosphatase receptor type Sa.
   
 0.553
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.