STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102223373Cytochrome P450, family 27, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family. (542 aa)    
Predicted Functional Partners:
LOC102237203
Cytochrome P450, family 26, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
  
 
0.924
LOC102217555
Zmp:0000001048; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.919
LOC102218710
Zgc:109982; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.919
LOC102218649
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.919
LOC102237570
Retinol dehydrogenase 8a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.919
LOC102217705
LRAT domain-containing protein.
    
 0.919
LOC102228836
Dehydrogenase/reductase (SDR family) member 4.
   
 
 0.919
LOC102229237
Zgc:112332; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
  0.918
LOC102225111
Retinol dehydrogenase 12, like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
  0.918
rdh10
Retinol dehydrogenase 10a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.918
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.