STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prkab1Protein kinase, AMP-activated, beta 1 non-catalytic subunit, a. (269 aa)    
Predicted Functional Partners:
prkaa2
Non-specific serine/threonine protein kinase.
    
 0.985
prkaa1
Non-specific serine/threonine protein kinase.
    
 0.985
prkag1
Protein kinase, AMP-activated, gamma 1 non-catalytic subunit.
   
 0.984
M3ZY25_XIPMA
Uncharacterized protein.
   
 0.981
LOC102230238
Protein kinase, AMP-activated, gamma 3a non-catalytic subunit.
   
 0.979
LOC102219828
Protein kinase, AMP-activated, gamma 3b non-catalytic subunit.
   
 0.979
stk11
Serine/threonine kinase 11; Belongs to the protein kinase superfamily.
    
 0.973
LOC102228613
Si:ch73-62l21.1.
    
 0.940
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
  
  
0.921
LOC102219234
Acetyl-CoA carboxylase alpha.
    
 0.914
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.