STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nat8lN-acetyltransferase 8-like. (280 aa)    
Predicted Functional Partners:
LOC102218635
Ribosomal modification protein rimK-like family member A.
     
 0.954
aspa
Aspartoacylase.
   
 
 0.939
asns
Asparagine synthetase [glutamine-hydrolyzing].
     
 0.927
got2
Aspartate aminotransferase.
   
 
 0.918
GOT1
Aspartate aminotransferase.
   
 
 0.905
got1
Aspartate aminotransferase.
   
 
 0.905
ASS1
Argininosuccinate synthase 1.
   
 
  0.902
Cad
Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.
   
 
  0.901
LOC102226323
Adenylosuccinate synthetase isozyme 1; Component of the purine nucleotide cycle (PNC), which interconverts IMP and AMP to regulate the nucleotide levels in various tissues, and which contributes to glycolysis and ammoniagenesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
     
  0.900
LOC102227815
Amine oxidase.
     
  0.900
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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