STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102229142Uncharacterized protein. (1405 aa)    
Predicted Functional Partners:
micu2
Mitochondrial calcium uptake 2.
   
 0.494
micu1
Mitochondrial calcium uptake 1.
   
 0.494
MCUB
Mitochondrial calcium uniporter dominant negative beta subunit.
   
 
 0.483
mcu
Mitochondrial calcium uniporter.
   
 
 0.483
LOC102220931
Uncharacterized protein.
     
 0.478
smdt1
Single-pass membrane protein with aspartate-rich tail 1a.
     
 0.478
LOC102229095
Ras-related GTP binding A.
    
 
 0.419
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.