STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC28Tetratricopeptide repeat domain 28. (2378 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.862
LOC102219029
TSC complex subunit 1.
   
 0.775
trap1
TNF receptor-associated protein 1.
   
 0.775
LOC102218115
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.775
LOC102218377
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
   
 0.775
LOC102219317
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 0.775
LOC102237756
TSC complex subunit 1b.
   
 0.775
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 
 0.708
ENSXMAP00000029880
TPR_REGION domain-containing protein.
 
      0.700
LOC102220683
Prostaglandin E synthase 3a (cytosolic).
   
 0.683
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
Server load: very high (>100%) [HD]