STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102217325Uncharacterized protein. (415 aa)    
Predicted Functional Partners:
LOC102220976
Trans-2,3-enoyl-CoA reductase-like 2a.
     
 0.900
LOC102224233
Trans-2,3-enoyl-CoA reductase a.
     
 0.900
tecr
Trans-2,3-enoyl-CoA reductase b.
     
 0.900
scp2
Sterol carrier protein 2b.
   
 
 0.616
LOC102226285
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.616
acot8
Acyl-CoA thioesterase 8.
     
 0.538
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 
 0.524
ephx2
Epoxide hydrolase 2, cytoplasmic.
  
 
 0.514
acot9
Acyl-CoA thioesterase 9, tandem duplicate 2.
  
 
 0.476
lypla2
Lysophospholipase 2.
     
 0.469
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.