STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102232069Engulfment and cell motility 3. (715 aa)    
Predicted Functional Partners:
dock4
Dedicator of cytokinesis 4b; Belongs to the DOCK family.
    
 0.993
dock5
Dedicator of cytokinesis 5; Belongs to the DOCK family.
  
 
 0.819
DOCK2
Dedicator of cytokinesis 2; Belongs to the DOCK family.
    
 0.777
dock1
Dedicator of cytokinesis 1; Belongs to the DOCK family.
    
 0.777
LOC102221116
Uncharacterized protein; Belongs to the DOCK family.
    
 0.760
dock3
Uncharacterized protein; Belongs to the DOCK family.
    
 0.760
clrn3
Clarin 3.
    
 0.717
clrn2
Clarin 2.
    
 0.717
crk
CRK proto-oncogene, adaptor protein.
    
 0.676
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.676
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.