STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asb1Ankyrin repeat and SOCS box containing 1. (349 aa)    
Predicted Functional Partners:
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.802
cul5
Cullin 5; Belongs to the cullin family.
    
 0.802
asb6
Ankyrin repeat and SOCS box containing 6.
  
 
 0.776
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.733
rnf7
Ring finger protein 7.
    
 0.675
LOC102238209
Platelet endothelial aggregation receptor 1.
    
 0.652
commd8
COMM domain containing 8.
   
  0.639
commd1
Copper metabolism (Murr1) domain containing 1.
    
  0.630
commd4
COMM domain containing 4.
    
 0.626
commd9
COMM domain containing 9.
   
  0.625
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.