STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102229067Solute carrier family 27 member 2a. (615 aa)    
Predicted Functional Partners:
LOC102224041
Uncharacterized protein.
  
 
 
0.920
LOC102228805
AMP-binding domain-containing protein.
  
  
 
0.902
bbs7
Bardet-Biedl syndrome 7.
   
 0.857
bbs1
Bardet-Biedl syndrome 1.
   
 0.849
bbs9
Bardet-Biedl syndrome 9.
   
 0.849
bbs4
Bardet-Biedl syndrome 4.
   
 0.837
ttc8
Tetratricopeptide repeat domain 8.
   
 0.827
LOC102222274
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.703
LOC102230990
Si:ch211-257p13.3; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.679
kifc1
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.679
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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