STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hdhd2Haloacid dehalogenase-like hydrolase domain containing 2. (259 aa)    
Predicted Functional Partners:
hells
Helicase, lymphoid specific.
      
 0.539
prkch
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
      
 0.526
snx5
Sorting nexin; Involved in several stages of intracellular trafficking.
      
 0.504
LOC102225867
Solute carrier organic anion transporter family member.
      
 0.499
LOC102233499
Solute carrier organic anion transporter family member.
      
 0.499
rrp9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
      
 0.487
LOC102230942
Progesterone immunomodulatory binding factor 1.
      
 0.487
slc40a1
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
      
 0.487
atp5pb
ATP synthase peripheral stalk-membrane subunit b.
   
  
 0.482
ndufa9
NADH:ubiquinone oxidoreductase subunit A9a.
   
  
 0.477
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.