STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbx1T-box transcription factor 1. (498 aa)    
Predicted Functional Partners:
fgf3
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.645
pax1
Paired box 1a.
   
  
 0.624
LOC102237424
Prickle homolog 1b.
      
 0.528
prickle2
Prickle homolog 2b.
      
 0.525
LOC102217015
Prickle homolog 2a.
      
 0.525
rchy1
Ring finger and CHY zinc finger domain containing 1.
   
    0.515
PRICKLE1
Prickle homolog 1a.
      
 0.502
VANGL1
Vang-like protein.
      
 0.465
nkx2-5
NK2 homeobox 5.
    
 
 0.457
gnb1l
Guanine nucleotide binding protein (G protein), beta polypeptide 1-like.
      
 0.420
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.