STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmtc2Transmembrane O-mannosyltransferase targeting cadherins 2a. (854 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.862
ints1
Integrator complex subunit 1.
    
 0.792
ints13
Integrator complex subunit 13.
   
 0.780
ints5
Integrator complex subunit 5.
    
 0.757
ints3
Integrator complex subunit 3.
    
 0.757
ints10
Integrator complex subunit 10.
   
 0.726
ints9
Integrator complex subunit 9.
   
 0.679
ints11
Integrator complex subunit 11.
   
 0.663
bbs9
Bardet-Biedl syndrome 9.
    
 0.653
M3ZT51_XIPMA
TROVE domain-containing protein.
   
 0.648
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.