mgat4c protein (Xiphophorus maculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

mgat4c

Mgat4 family member C. (482 aa)

Predicted Functional Partners:

mgat5

0.950

LOC102232182

0.926

LOC102226673

0.926

LOC102236488

0.921

LOC102218707

0.903

MGAT4C

0.900

LOC102228910

0.422

polr3c

0.414

chordc1

0.410

polr3b

0.410

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102218707	LOC102226673	ENSXMAP00000029150	ENSXMAP00000012331	Uncharacterized protein.	Uncharacterized protein.	0.900
LOC102218707	LOC102232182	ENSXMAP00000029150	ENSXMAP00000006592	Uncharacterized protein.	Uncharacterized protein.	0.900
LOC102218707	LOC102236488	ENSXMAP00000029150	ENSXMAP00000002012	Uncharacterized protein.	Uncharacterized protein.	0.900
LOC102218707	MGAT4C	ENSXMAP00000029150	ENSXMAP00000012750	Uncharacterized protein.	MGAT4 family member C.	0.903
LOC102218707	mgat4c	ENSXMAP00000029150	ENSXMAP00000002863	Uncharacterized protein.	Mgat4 family member C.	0.903
LOC102218707	mgat5	ENSXMAP00000029150	ENSXMAP00000027178	Uncharacterized protein.	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase.	0.900
LOC102226673	LOC102218707	ENSXMAP00000012331	ENSXMAP00000029150	Uncharacterized protein.	Uncharacterized protein.	0.900
LOC102226673	LOC102232182	ENSXMAP00000012331	ENSXMAP00000006592	Uncharacterized protein.	Uncharacterized protein.	0.901
LOC102226673	MGAT4C	ENSXMAP00000012331	ENSXMAP00000012750	Uncharacterized protein.	MGAT4 family member C.	0.921
LOC102226673	mgat4c	ENSXMAP00000012331	ENSXMAP00000002863	Uncharacterized protein.	Mgat4 family member C.	0.926
LOC102228910	mgat4c	ENSXMAP00000034795	ENSXMAP00000002863	Zgc:153675.	Mgat4 family member C.	0.422
LOC102228910	polr3b	ENSXMAP00000034795	ENSXMAP00000039728	Zgc:153675.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.577
LOC102232182	LOC102218707	ENSXMAP00000006592	ENSXMAP00000029150	Uncharacterized protein.	Uncharacterized protein.	0.900
LOC102232182	LOC102226673	ENSXMAP00000006592	ENSXMAP00000012331	Uncharacterized protein.	Uncharacterized protein.	0.901
LOC102232182	MGAT4C	ENSXMAP00000006592	ENSXMAP00000012750	Uncharacterized protein.	MGAT4 family member C.	0.921
LOC102232182	mgat4c	ENSXMAP00000006592	ENSXMAP00000002863	Uncharacterized protein.	Mgat4 family member C.	0.926
LOC102236488	LOC102218707	ENSXMAP00000002012	ENSXMAP00000029150	Uncharacterized protein.	Uncharacterized protein.	0.900
LOC102236488	MGAT4C	ENSXMAP00000002012	ENSXMAP00000012750	Uncharacterized protein.	MGAT4 family member C.	0.921
LOC102236488	mgat4c	ENSXMAP00000002012	ENSXMAP00000002863	Uncharacterized protein.	Mgat4 family member C.	0.921
MGAT4C	LOC102218707	ENSXMAP00000012750	ENSXMAP00000029150	MGAT4 family member C.	Uncharacterized protein.	0.903