STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106699791Uncharacterized protein. (661 aa)    
Predicted Functional Partners:
birc6
Baculoviral IAP repeat containing 6.
   
 0.782
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.743
rps27a
Ribosomal protein S27a.
    
 0.718
ube2v1
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.696
LOC102228788
Si:ch73-335l21.4.
    
 0.660
ripk4
Receptor-interacting serine-threonine kinase 4.
   
 0.634
tradd
Tnfrsf1a-associated via death domain.
    
 0.623
zfand4
Zinc finger, AN1-type domain 4.
    
 0.615
Uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.584
ENSXMAP00000036141
Ubiquitin-like domain-containing protein.
    
  0.584
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.