STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp4r3aSMEK homolog 1, suppressor of mek1 (Dictyostelium). (818 aa)    
Predicted Functional Partners:
ppp4c
Serine/threonine-protein phosphatase.
   
 
 0.945
ppp4r2
Protein phosphatase 4, regulatory subunit 2b.
   
 
 0.909
LOC102233120
Uncharacterized protein.
   
 
 0.909
ptpa
Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
    
 
 0.842
LOC102224037
Checkpoint kinase 2.
    
 
 0.644
krtcap2
Keratinocyte associated protein 2.
    
 
 0.620
ppp4r1
WRNPLPNID domain-containing protein.
   
  
 0.600
ppp4r3b
Protein phosphatase 4, regulatory subunit 3B.
  
 
0.600
supt5h
Transcription elongation factor SPT5.
    
   0.598
hmg20a
High mobility group 20A.
   
  
 0.560
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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