STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ca12Carbonic anhydrase XII; Belongs to the alpha-carbonic anhydrase family. (345 aa)    
Predicted Functional Partners:
cbln1
Cerebellin 1 precursor.
      
 0.650
LOC102226246
Neurexophilin; May be signaling molecules that resemble neuropeptides.
   
  
 0.617
rpf2
Ribosome production factor 2 homolog.
   
 
 0.599
hyou1
Hypoxia up-regulated 1.
      
 0.538
gad2
Glutamate decarboxylase 2.
     
 0.499
ALX3
ALX homeobox 3.
      
 0.493
grwd1
Glutamate-rich WD repeat containing 1.
   
  
 0.486
LOC102229550
Uncharacterized protein; Belongs to the alpha-carbonic anhydrase family.
  
  
0.485
LOC102225493
Carbonic anhydrase 15; Belongs to the alpha-carbonic anhydrase family.
  
  
0.475
LOC102216690
Carbonic anhydrase IV b; Belongs to the alpha-carbonic anhydrase family.
  
  
0.471
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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