STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
efhc1EF-hand domain (C-terminal) containing 1. (551 aa)    
Predicted Functional Partners:
Pacrg
PARK2 co-regulated.
  
 
 0.943
Wdr90
DUF667 domain-containing protein.
    
 
 0.904
ENSXMAP00000030064
WD_REPEATS_REGION domain-containing protein.
    
 
 0.904
tekt2
Tektin 2 (testicular).
   
 
 0.851
tekt3
Tektin 3.
   
 
 0.846
LOC102232903
Uncharacterized protein.
   
 
 0.835
Cfap126
Uncharacterized protein.
   
 
 0.835
cfap20
Cilia and flagella associated protein 20.
    
 
 0.834
efhb
Uncharacterized protein.
   
   0.827
efhc2
EF-hand domain (C-terminal) containing 2.
  
 
0.824
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.