STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102236975Bromodomain containing 2. (829 aa)    
Predicted Functional Partners:
RXRB
Retinoid X receptor beta.
    
 
 0.655
LOC102232099
Ral guanine nucleotide dissociation stimulator-like 2.
      
 0.654
taf7l
TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 
 0.653
LOC102232352
Pre-B-cell leukemia homeobox 2.
   
  
 0.630
LOC102217676
PHD finger protein 1.
      
 0.629
LOC102219510
Proteasome subunit beta.
    
 
 0.628
e2f1
E2F transcription factor 1.
    
 
 0.589
dmap1
DNA methyltransferase 1 associated protein 1.
    
 
 0.577
LOC102237505
Death-domain associated protein.
   
 
 0.551
nsd3
Nuclear receptor binding SET domain protein 3.
   
 
 0.551
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.