STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ncdnNeurochondrin. (764 aa)    
Predicted Functional Partners:
aar2
AAR2 splicing factor.
    
 
 0.590
mms19
MMS19 homolog, cytosolic iron-sulfur assembly component.
      
 0.493
LOC102222522
Regulator of G protein signaling 8.
      
 0.487
ttc27
Tetratricopeptide repeat domain 27.
    
 
 0.484
znhit2
Zinc finger, HIT-type containing 2.
    
 
 0.477
grasp
GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein.
      
 0.457
eapp
E2f-associated phosphoprotein.
    
 
 0.452
dner
Delta/notch-like EGF repeat containing.
      
 0.412
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.