STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102221351RAB11 family interacting protein 4 (class II) a. (603 aa)    
Predicted Functional Partners:
rab11fip4
RAB11 family interacting protein 4 (class II) b.
  
  
 
0.901
RAB11FIP3
RAB11 family interacting protein 3 (class II).
     
 
0.900
gsc
Goosecoid.
    
   0.804
LOC102226911
RAB11a, member RAS oncogene family, like.
    
 0.770
rab11a
RAB11a, member RAS oncogene family.
    
 0.770
LOC102218510
RAB11B, member RAS oncogene family, b.
    
 0.770
LOC102236307
Uncharacterized protein.
    
 0.770
LOC102219022
RAB11B, member RAS oncogene family, a.
    
 0.770
LOC102221458
RAB25, member RAS oncogene family a.
    
 0.720
rab25
RAB25, member RAS oncogene family b.
    
 0.720
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.