STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdap1Pdgfa associated protein 1b. (182 aa)    
Predicted Functional Partners:
rmnd1
Required for meiotic nuclear division 1 homolog.
      
 0.487
rcn2
Reticulocalbin 2.
      
 0.485
dtymk
Deoxythymidylate kinase (thymidylate kinase).
      
 0.463
LOC102222285
4F5 domain-containing protein.
      
 0.414
cdc42ep4
CDC42 effector protein (Rho GTPase binding) 4b.
      
 0.412
LOC102230920
Potassium channel tetramerization domain containing 6b.
      
 0.412
LOC102233791
Platelet-derived growth factor alpha polypeptide a; Belongs to the PDGF/VEGF growth factor family.
    
 
 0.411
pdgfa
Platelet-derived growth factor alpha polypeptide b; Belongs to the PDGF/VEGF growth factor family.
    
 
 0.411
ENSXMAP00000025082
Uncharacterized protein.
      
 0.408
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.