STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xpnpep3X-prolyl aminopeptidase 3, mitochondrial. (504 aa)    
Predicted Functional Partners:
pmpca
Peptidase (mitochondrial processing) alpha.
   
 
 0.676
mipep
Mitochondrial intermediate peptidase.
   
 
 0.672
atp23
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
      
 0.641
dnpep
Aspartyl aminopeptidase; Belongs to the peptidase M18 family.
   
 
 0.622
oma1
OMA1 zinc metallopeptidase.
  
  
 0.613
LOC102224390
Desmocollin 2 like; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
      
 0.581
anks3
Ankyrin repeat and sterile alpha motif domain containing 3.
    
 0.581
immp2l
Mitochondrial inner membrane protease subunit.
   
  
 0.571
LOC102219887
Serine protease; Belongs to the peptidase S1B family.
      
 0.560
LOC102219450
Ubiquinol-cytochrome c reductase core protein 1.
   
 
 0.538
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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