STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
myrfMyelin regulatory factor. (994 aa)    
Predicted Functional Partners:
spo11
SPO11 initiator of meiotic double stranded breaks.
    
 
 0.691
LOC102223474
Cardiomyopathy associated 5.
    
 
 0.626
gigyf1
GRB10 interacting GYF protein 1a.
      
 0.625
trappc12
Trafficking protein particle complex 12.
      
 0.616
smg6
SMG6 nonsense mediated mRNA decay factor.
      
 0.604
sspo
Subcommissural organ spondin.
      
 0.560
cnot1
CCR4-NOT transcription complex, subunit 1.
      
 0.560
dhrs1
Homeobox and leucine zipper encoding a.
      
 0.560
MOK
MOK protein kinase.
    
 
 0.519
ICK
Intestinal cell kinase.
    
 
 0.519
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.